Prepare for upcoming transitions in Defender for Servers

Last summer, within the scope of the upcoming Log Analytics agent deprecation, we announced a new agent strategy for for Servers with the goal to simplify the onboarding and reduce external dependencies in our offering while improving existing and adding new capabilities. As part of that new strategy, customers should enable, agentless scanning as part of for Servers Plan 2, and integration with Microsoft for Endpoint in both Defender for Servers plans as a unified security agent.


When we released Defender for Cloud (which was formerly known as Azure Security Center) a few years back, we had to rely on Log Analytics agent for some capabilities in both, our foundational CSPM, and in our server protection offerings. In the meantime, there had been many changes especially in the Microsoft Security platform stack, and with the upcoming deprecation of this legacy monitoring agent in summer 2024, we now had the unique chance to re-evaluate our dependencies, to remove some of them while further improving our capabilities at the same time.

With that approach, we were able to reduce the complexity of deploying Defender for Servers across your environment while adding additional coverage to resources that haven't been protected before.

What does it mean for customers?

The new strategy provides three main benefits for customers:

  1. Unification of agents: Instead of using three different agents and extensions (Log Analytics/ agent, Azure Policy guest configuration extension, Microsoft Defender for Endpoint), only one agent (Defender for Endpoint) will be required to provide in-depth security value, resulting in simple onboarding and less deployment friction.
  2. Reduced complexity: Only agentless scanning and Defender for Endpoint integration need to be enabled in order to benefit from all security value. With that, monitoring demand for prerequisites is reduced at the same time.
  3. Hybrid approach: Defender for Endpoint sensor is used for in-depth machine security and real-time detections and response, while agentless scanning provides enhanced coverage, full visibility within hours with no performance impact on machines, and advanced security capabilities such as secret scanning.

What did we do to make sure this new strategy aligns with customers' needs?

During the last one and half years, we have already been working on putting additional coverage and capabilities in place, before removing legacy dependencies:

  • We released agentless scanning as part of Defender for Servers Plan 2 and Defender CSPM. This new platform provides coverage for any multicloud VM, regardless of its operating system and without having to rely on an agent. While in Defender CSPM, we don't want to force you to deploy an agent just to benefit from enhanced security posture insights, such as vulnerability assessment or secret findings, in Defender for Servers Plan 2 it complements our agent-based approach which offers real-time threat detection and in-depth analysis by covering machines that don't have an agent (yet) deployed, or by scanning locations that are excluded in an agent-based solution. While the same agentless infrastructure is used in both plans, Defender for Servers Plan 2 comes with some unique capabilities, such as agentless malware scanning, or agentless EDR discovery. To learn more about agentless scanning in depth, please read this blog article.
  • MDE direct onboarding- for customers who are mainly interested in deploying Defender for Endpoint (MDE) to their non-Azure machines, but who are not looking into additional management capabilities or platform extensibility, we introduced a new direct onboarding approach to Defender for Servers via Microsoft Defender for Endpoint, without forcing customers to deploy Azure Arc-enabled servers in a first step. While for non-Azure machines, Azure Arc-enabled servers still is the recommended integration approach since it offers additional capabilities outside of Defender for Servers' scope, customers can now choose which option they prefer.
  • Unified vulnerability assessments: Microsoft Defender Vulnerability Management (MDVM) has been positioned as the strategic vulnerability assessment solution in Defender for Cloud. This includes vulnerability scanning for servers, and containers, and it is used in our agentless and agent-based vulnerability assessment capabilities. This decision allowed us to further reduce our dependency on external vendors on one hand, and an even closer collaboration with the Microsoft-own MDVM team on the other hand to improve scan results, scan intervals, and integration.
  • Granular deployment options: Defender for Servers Plan 1 can now be enabled on a subset of machines in a subscription, and with Defender for Servers Plan 1 or 2 enabled on a subscription, individual machines can be downgraded, or exempted from coverage. To learn more, read this Microsoft learn document.

Besides all of these recent improvements in the product, there are two main changes coming towards us within the next few months.

What will change for Defender for Servers customers going forward?

There are two main milestones in the next few months that we encourage our customers to plan and prepare for:

  1. In May 2024, we will discontinue our integration with Qualys VA. As of then, the Qualys VA extension can no longer be deployed to new machines, and we will start to migrate existing machines to Microsoft Defender Vulnerability Management as the underlying vulnerability assessment solution. While new customers already benefit from Microsoft Defender Vulnerability Management since January 15th, existing customers will automatically be migrated, unless they are using the Qualys BYOL integration in their environment.
  2. In August 2024, the Log Analytics agent will be deprecated and replaced by agent as its successor. While this is an overall Azure motion, Defender for Servers will no longer depend on the monitoring agent going forward. In July 2023, we shared our updated plan and strategy towards Log Analytics agent deprecation, which includes that all Defender for Servers Plan 2 capabilities will be provided either based on Microsoft Defender for Endpoint as a unified security agent, or based on agentless capabilities, including agentless scanning, and platform-based agentless features.

What are the prerequisites for the upcoming changes?

As part of this new strategy, there are some prerequisites that should be in place so you will be prepared for upcoming changes:

  • In both Defender for Servers plans, you should enable Microsoft Defender for Endpoint integration. While this integration is enabled by default when enabling any Defender for Servers plan, it is worth making sure the MDE extension is successfully deployed to your Azure VMs and Azure Arc-enabled servers.
  • In Defender for Servers Plan 2, agentless scanning should be enabled to benefit from agentless malware, secret, and vulnerability scanning, software inventory, and EDR discovery.
  • While we will start to auto-migrate customers currently using Qualys VA to Microsoft Defender Vulnerability Management in May 2024, we encourage you to migrate on your own, today. New subscriptions can no longer use Qualys VA and already benefit from MDVM as their vulnerability assessment solution, and in order to avoid scan results from different solution across your estate, we have published a migration guide to help you with this task. Be aware that in order to finalize the migration, you should remove the Qualys VA extension from your machines. Removing the extension will automatically uninstall the Qualys agent inside the operating system.
  • While going forward, Defender for Servers will no longer use Log Analytics or agent to provide security value to machines, there are scenarios in which you might want to migrate to Azure Monitor Agent for further log ingestion scenarios. In this case, machines that are covered by Defender for Servers Plan 2 will continue to benefit from the 500 MB data allowance that is granted for log ingestion. For a migration guidance as part of your Microsoft Sentinel enrollment, please see this documentation. For a general migration guidance, see this documentation.
  • In case you no longer need the legacy Log Analytics agent, make sure you remove it from your machines. For this purpose, the Azure Monitor team released a utility to discover and remove Log Analytics agent from your machines.

How can I track my migration efforts?

Today, we are excited to release the new Defender for Servers deployment status workbook. With this workbook, you will have four different pivots into your environment, highlighting the most important information within the scope of the upcoming transitions.

Defender for Servers coverage across subscriptions

The first section of the workbook will show information about all subscriptions with Defender for Servers enabled. The pie chart on the left side shows the amount of subscriptions with Defender for Servers Plan 1, or Plan 2 enabled, while the table shows a detailed view on the plan per subscription.

Defender for Servers coverage across subscriptionsDefender for Servers coverage across subscriptions

In case Defender for Servers Plan 2 is enabled, the table also shows if agentless scanning is enabled, or not. You can click the enabled or disabled value in the table to automatically be redirected to the corresponding setting for the subscription you clicked the value on, so you can seamlessly enable agentless scanning accordingly.

Log Analytics agent coverage across machines

The second workbook section focuses on machines that still have the legacy Log Analytics agent deployed. While it depends on your own scenario if you want to stick with Log Analytics agent, or migrate to Azure Monitor agent today, it is required to enable Defender for Endpoint integration so you will benefit from all agent-based scenarios in Defender for Servers Plan 2 going forward.

Log Analytics agent coverage across machinesLog Analytics agent coverage across machines

Therefore, this section shows machines that still have the Log Analytics agent deployed and brings this information into context with the MDE deployment status. The pie chart on the left shows the total amount of machines with/without Log Analytics agent deployed. The table only shows machines that still have the agent, including the Log Analytics workspace they are connected to alongside information about the Defender for Endpoint deployment status for each machine.

In the end, it doesn't matter how many machines in your environment still use the Log Analytics agent, but you want to make sure all of them have Defender for Endpoint deployed and the provision state shows “succeeded”.

Defender for Endpoint coverage across machines

The third workbook section focuses on Defender for Endpoint coverage, only. The pie chart will show the total amount of machines in your environment, divided by Defender for Endpoint deployment status. The table shows all machines, regardless of their Log Analytics agent deployment, so it will also show machines that do not or no longer have the legacy agent deployed.

Defender for Endpoint coverage across machinesDefender for Endpoint coverage across machines

With that, even if you are not using Log Analytics agent anymore, you can still see the Defender for Endpoint coverage across all your machines.

Qualys VA coverage across machines

The fourth and final section in the workbook shows the coverage of Qualys VA across your environment. While the pie chart will show all machines, including their Qualys deployment status, the table will focus on machines with the extension deployed, only.

Qualys VA coverage across machinesQualys VA coverage across machines

In case there are no machines covered by Qualys (anymore), you will see a success message, as shown below.

Machines with Qualys VA extension deployedMachines with Qualys VA extension deployed


In case you are using Defender for Servers Plan 2, make sure you have both, agentless scanning, and Defender for Endpoint integration enabled so you are prepared for the upcoming deprecation of Log Analytics agent. In case you have been using our Qualys VA integration, start your migration to MDVM today! With the new Defender for Servers deployment status workbook, we offer you a handy tool to keep track of your migration efforts.

Now, it's your turn. Deploy the workbook, discover your machines' current state, and get started towards the future of Defender for Servers!


Thanks to Gal Fenigshtein and Miri Herszfang for reviewing this article and providing their feedback.


This article was originally published by Microsoft's Defender for Cloud Blog. You can find the original article here.